Research

In the focus of our research are enzymes, which are elaborate proteins that catalyse cellular reactions with high specificity and efficiency.

Projects

We are using rational design and directed evolution to engineer the stability and catalytic activity of enzymes, experimentally reconstruct the natural evolution of enzymes, assign functions to uncharacterised enzymes, and characterize allosteric interactions within multi-enzyme complexes. To this end, we apply a broad range of experimental and computational methods.

 

Model system

Our preferred model system is the (ba)8-barrel family of enzymes, which is the most frequently encountered protein fold. (ba)8-barrel enzymes catalyse a large variety of mechanistically diverse reactions. The fold of the canonical (ba)8-barrel consists of a central barrel of eight parallel b-strands, which are surrounded by eight external a-helices. Connecting loops are located at both the N-terminal (a-b loops) and the C-terminal (b-a loops) face of the barrel. Due to the spatial separation of structural elements that are important for stability and catalytic activity, (ba)8-barrels provide an ideal scaffold for the study of enzyme evolution and the design of new enzymatic activities.

 

 

 

The (ba)8-barrel fold

Publications of BC II

Pubmed Entries:

R. Sterner R. Merkl  P. Babinger