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 Statistical Bioinformatics - JOURNAL CLUB [2012]

Date Lecturer Topic
25.12. Santa Claus ~~~Christmas ~~~~
18.12. Mohammad . . .
11.12. Christian H. . . .
04.12. Giusi

A new shrinkage estimator improves differential expression detection in RNA-seq data

27.11. Christian K. nCounter: direct multiplexed measurement of gene expression with color-coded probe pairs
20.11. Qian Systematic identification of edited microRNAs in the human brain
13.11. Franziska Inferring gene regulatory networks from gene expression data by path consistency algorithm based on conditional mutual information
06.11. Katharina Meyer Predicting cell-type-specific gene expression from regions of open chromatin
30.10. Toni Moll Drug target prediction using adverse event report systems: a pharmacogenomic approach
23.10. Martin Pirkl An Ensemble Approach for Inferring Semi-quantitative Regulatory Dynamics for the Differentiation of Mouse Embryonic Stem Cells Using Prior Knowledge
16.10. Claudio Lottaz Drug development and clinical trials — the path to an approved cancer drug
09.10. Rainer Discussion about 3rd semester programming practicals
02.10. Mohammad Sadeh ~~~~ cancel  ~~~~~
25.09. ~~~ Microarray course
18.09. Christian Hundsrucker A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae.
11.09. ~~~ oral Computational Science exams
05./06.09 Group Retreat in the Ritterschenke Randeck
01.08. to 31.8.  summer brek ~~~ summer break ~~~
31.07. Julia Engelmann "Google goes cancer"

Mathias Gorski

[AG Heid]

Genomweite Assoziationsstudien in der Genetischen Epidemiologie
18.07. 16:00
Matthias Drton
[University of Chicago]
Bayesian model choice and information criteria in sparse generalized linear models
10.07. Open discussion Student projects
03.07. Qian Wang . . .
26.06. Franziska Taruttis Stiching together multiple data dimensions reveals interacting metabolomic and transcriptomic networks that modulate cell regulation
19.06. Daniela Herold/ Mohammad Sadeh Trial talk for Workshop Statistical Computing
12.06. Katharina Meyer Chromatin Computation
05.06. Toni Moll Trial talk for the 5th NGFNplus meeting
29.05. Martin Pirkl Elucidating regulatory mechanisms downstream of a signaling pathway using informative experiments
22.05. Claudio Lottaz Genomatix for analysis of NGS data - Claims and first attempts
15.05. Mohammad Sadeh Not Confoundable Partial Network Reconstruction
09.05. Christian Hundsrucker Reconstructing cancer genomes from paired-end sequencing data
02.05. ~cancelled~ ~cancelled~
25.04. Julia Engelmann Cell communication in primary liver cancer
18.04. Daniela Herold A likelihood-free approach to tumor progression modeling
11.04.  ~Easter Break~ ~ Easter Break ~
05.04. Qian Wang  
04.04. Christian Kohler Cancer Genome sequencing [paper]
28.03.   ~cancelled~
Qian Wang
21.03.  ~cancelled~
Julia Engelmann
14.03. ~cancelled~ ~cancelled~
07.03. ~cancelled~ ~cancelled~
29.02. Katharina Meyer A human B-cell interactome identifies MYB and FOXM1 as master regulators of proliferation in germinal centers
22.02. Katharina Meyer ~postponed~
15.02. Toni Moll Progress Report
08.02. Martin Pirkl
01.02. defense Matthias . . .
25.01. Stefan Bentink (guest) . . .
18.01. Practical students  . .
11.01.  - - - . . .

  1. Department of Medicine
  2. Institute of Functional Genomics