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2013

 Statistical Bioinformatics - JOURNAL CLUB [2013]



Date Lecturer Topic
10.12. Giusi ~ postponed ~
03.12.

4 pm

Room R008

Guest: Simon Anders
(EMBL, Heidelberg)
Drift and conservation in alternative isoform expression
26.11. Toni Restricted Boltzmann Machines
12.11. Claudio Unreliable research - Troouble at the lab [ pdf ] [ ppt ]

08.11.

Friday

4 pm Room H42

Guest: Luiz Penalva
(Children's Cancer Research Institute

(San Antonio, USA)

Sharing gene networks:

Interplay between RNA binding proteins and miRNAs in cancer

29.10. Martin Boolean Hypergraphs
15.10. Frank . . .
08.10. Guest: Thomas Sakoparnig
(ETH Zurich, D-BSSE)
Identification of driver genes based on mutation timing
01.10. Maurits Progress report: From kangaroos to smoking guinea pigs
24.09. Franziska Boosting Probabilistic Graphical Model Inference by Incorporating Prior Knowledge from Multiple Sources
17.09. Rainer Microarray course
August
September
 - - -  ~~~ summer break ~~~
30.07. Toni Most Random Gene Expression Signatures Are Significantly Associated with Breast Cancer Outcome (http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1002240)
23.07. ISMB/ECCB ~~~ cancel ~~~
16.07. Claudio
Discovery and preclinical validation of drug indications using compendia of public gene expression data [pdf] [ppt]
09.07. Martin Voom! Precision weights unlock linear model analysis tools for RNA-seq read counts. [based on Preprint]
02.07. Andre
de Carvalho
Algorithm recommendation
using metalearning
25.06. Ina
Koch
Petri net formalism to explore system's behavior of disease-related pathways
18.06. Michael
Bauer
Hidden Markov models (from "Introduction to Bioinformatics Algorithms")
17.06.
10:15
Daniela Progress Report
11.06. Michael
Huttner
Phylogeny (from "Introduction to Bioinformatics Algorithms")
04.06. Viktoria
Drasch
Gene prediction (from "Introduction to Bioinformatics Algorithms")
28.05. Leonie
Jennert
Genome assembly (from "Introduction to Bioinformatics Algorithms")
21.05. Holy Spirit ~~~ Pentecost holiday ~~~
14.05. Christian K. Towards practical, high-capacity, low-maintenance information storage in synthesized DNA [Goldman et al, Nature Feb 2013] [pdf]
07.05. Jack Sampling DAGs
30.04. Christian K. ~~ postponed ~~
23.04. Franziska Progress Report
16.04.
14:00
Katharina Thesis defense
09.04. Julia Next-generation sequencing course
02.04. Easter bunny ~~~ Easter holiday ~~~
26.03. Mohammad
Katharina
RECOMB practice talk
PhD-defence practice talk
19.03. Rainer Microarray course
12.03.
14:00
PhD-
Candidates
 ~~~cancelled ~~~
cancelled #05.03.
14:00
Dorine Kohlbacher ~~~ cancelled ~~~
26.02. Katharina Predicting Migration in Glioblastoma
19.02. Prof. Dr. Martin Dugas (Uni Münster) Clinical Phenotypes
13.02. (Mi!) Toni Progress Report
05.02. Martin Progress Report & Revisiting the Training of Logic Models of Protein Signaling Networks with ASP
22.01. Claudio CpG_MPs: identification of CpG methylation patterns of genomic regions from high-throughput bisulfite sequencing data [pdf] [ppt]
15.01. Julia Analysis of genome-wide expression after knock-down with siRNAs and siPools
08.01. Daniela Revisiting global gene expression analysis
01.01. Santa Claus ~~~ new year ~~~~


  1. Department of Medicine
  2. Institute of Functional Genomics