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content of 'B.Sc./M.Sc. Studiengang Computational Science | Informatik in den Naturwissenschaften'

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Journal Club

 Statistical Bioinformatics - JOURNAL CLUB [2020]

          We meet weekly on Tuesdays, 9:30 in the institute's seminar room

                                         ATTENTION:

DUE TO THE RECENT EVENTS, THE GROUPMEETING WILL CURRENTLY NOT TAKE PLACE AT THE INSTITUTES SEMINAR ROOM. AS SOON AS WE TURN BACK TO REGULAR OPERATIONS, WE'LL LET YOU KNOW. TAKE CARE !


      Date                 Lecturer           Topic

14.01.

(09:30)

Andreas Lösch

Seminar Algorithmische Bioinformatik

Race in a genome: long read sequencing, ethnicity-specific reference genomes and the shifting horizon of race [paper] [talk]

14.01.

(10:15)

Robert Bosek        

Seminar Algorithmische Bioinformatik

High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution [paper] [talk]

21.01.

Rainer Spang

~ ~ ~ cancelled ~ ~ ~

28.01.

Gunther Glehr

Cell Cloud Classification

04.02.

Kevin Rupp

Modelling Metastasis using Mutual Hazard Networks

11.02.

cancelled

  ~ ~ ~ Microarray Analysis Coures ~ ~ ~

18.02.

Christoph Kopp

cellVlab: convolutional neural network to predict luminescence markers of breast cancer cells

25.02.

Victoria-Marie Rothe

Master thesis talk

Nucleosome dynamics during the erythrocytic life cycle of Plasmodium falciparum

03.03.

cancelled

~ ~ ~ cancelled ~ ~ ~

10.03.

(10:30)

Michael Huttner

Modern frontend web applications using react.js

17.03.

Rainer Spang

Public Relations for the Statistical Bioinformatics Group

24.03.

Christian Kohler

Automated Server Management using ANSIBLE

31.03.

Rudi Schill

07.04.

Marian Schön

14.04.

Easter Break

~ ~ ~ cancelled ~ ~ ~

21.04.

Gunther Glehr

28.04.

Claudio Lottaz

05.05.

Lena Buck

12.05.

Rainer Spang

Public Relations for the Statistical Bioinformatics Group

19.05.

Nicole Seifert

26.05.

Jakob Simeth

02.06.

Pentecost Break

~ ~ ~ cancelled ~ ~ ~

09.06.

Michael Huttner

16.06.

TBA

Statistical Bioinformatics (Master)

23.06.

TBA

Statistical Bioinformatics (Master)

30.06.

TBA

Statistical Bioinformatics (Master)

07.07.

Kevin Rupp

 

14.07.

Christoph Kopp

 

21.07.

Rainer Spang

Public Relations for the Statistical Bioinformatics Group

27.07. - 08.09.

Summer Break

~ ~ ~ cancelled ~ ~ ~

15.09.

Christian Kohler

 

22.09.

Rudolf Schill

 

29.09.

Marian Schön

 




Genomische Datenanalyse

Information and material for the microarray workshop

Genomische Datenanalyse

Lecture Practical
Room check information in VVZ #57046 check information in VVZ #57046
Tutor Rainer Spang

Description

The workshop provides an introduction to the analysis of genomic data. The analysis of microarray data sets is practiced using the statistical software R and Bioconductor.

Schedule

Lecture  Mo-Fr  10:00h - 12:00h (st)
Practical  Mo-Fr  13:00h - 18:00h (st)

Lecture Slides

Day Lecture Practical
1 Introduction A gentle Introduction into R
2 Normalization Quality Control and Normalization
3 Screening Differential Geneexpressionanalysis
4

Clustering

Clustering
5 Classification Classification

More informations and PDF fil

Programming with R

Literature

Slides last updated on 2019-07-31 .



  1. Department of Medicine
  2. Institute of Functional Genomics

Teaching Statistical Bioinformatics

 

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