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Computational Science
content of 'B.Sc./M.Sc. Studiengang Computational Science | Informatik in den Naturwissenschaften'
www.uni-regensburg.de/physik/computational-science/index.html
Journal Club
Statistical Bioinformatics - JOURNAL CLUB [2020]
We meet weekly on Tuesdays, 9:30 in the institute's seminar room
ATTENTION:
DUE TO THE RECENT EVENTS, THE GROUPMEETING WILL CURRENTLY NOT TAKE PLACE AT THE INSTITUTES SEMINAR ROOM. AS SOON AS WE TURN BACK TO REGULAR OPERATIONS, WE'LL LET YOU KNOW. TAKE CARE !
| Date | Lecturer | Topic |
|---|---|---|
14.01.(09:30) | Andreas Lösch | Seminar Algorithmische Bioinformatik Race in a genome: long read sequencing, ethnicity-specific reference genomes and the shifting horizon of race [paper] [talk] |
14.01.(10:15) | Robert Bosek | Seminar Algorithmische Bioinformatik High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution [paper] [talk] |
21.01. | Rainer Spang | ~ ~ ~ cancelled ~ ~ ~ |
28.01. | Gunther Glehr | Cell Cloud Classification |
04.02. | Kevin Rupp | Modelling Metastasis using Mutual Hazard Networks |
11.02. | cancelled | ~ ~ ~ Microarray Analysis Coures ~ ~ ~ |
18.02. | Christoph Kopp | cellVlab: convolutional neural network to predict luminescence markers of breast cancer cells |
25.02. | Victoria-Marie Rothe | Master thesis talk Nucleosome dynamics during the erythrocytic life cycle of Plasmodium falciparum |
03.03. | cancelled | ~ ~ ~ cancelled ~ ~ ~ |
10.03.(10:30) | Michael Huttner | Modern frontend web applications using react.js |
17.03. | Rainer Spang | Public Relations for the Statistical Bioinformatics Group |
24.03. | Christian Kohler | Automated Server Management using ANSIBLE |
31.03. | Rudi Schill | |
07.04. | Marian Schön | |
14.04. | Easter Break | ~ ~ ~ cancelled ~ ~ ~ |
21.04. | Gunther Glehr | |
28.04. | Claudio Lottaz | |
05.05. | Lena Buck | |
12.05. | Rainer Spang | Public Relations for the Statistical Bioinformatics Group |
19.05. | Nicole Seifert | |
26.05. | Jakob Simeth | |
02.06. | Pentecost Break | ~ ~ ~ cancelled ~ ~ ~ |
09.06. | Michael Huttner | |
16.06. | TBA | Statistical Bioinformatics (Master) |
23.06. | TBA | Statistical Bioinformatics (Master) |
30.06. | TBA | Statistical Bioinformatics (Master) |
07.07. | Kevin Rupp |
|
14.07. | Christoph Kopp |
|
21.07. | Rainer Spang | Public Relations for the Statistical Bioinformatics Group |
27.07. - 08.09. | Summer Break | ~ ~ ~ cancelled ~ ~ ~ |
15.09. | Christian Kohler |
|
22.09. | Rudolf Schill |
|
29.09. | Marian Schön |
|
Genomische Datenanalyse
Information and material for the microarray workshop
Genomische Datenanalyse
| Lecture | Practical | |
| Room | check information in VVZ #57046 | check information in VVZ #57046 |
| Tutor | Rainer Spang |
Description
The workshop provides an introduction to the analysis of genomic data. The analysis of microarray data sets is practiced using the statistical software R and Bioconductor.
Schedule
| Lecture | Mo-Fr | 10:00h - 12:00h (st) |
| Practical | Mo-Fr | 13:00h - 18:00h (st) |
Lecture Slides
| Day | Lecture | Practical |
| 1 | Introduction | A gentle Introduction into R |
| 2 | Normalization | Quality Control and Normalization |
| 3 | Screening | Differential Geneexpressionanalysis |
| 4 | Clustering | |
| 5 | Classification | Classification |
More informations and PDF fil
Programming with R
Literature
Slides last updated on 2019-07-31 .
Christian Kohler - 26.03.2020 04:48 