Date | Lecturer | Topic |
---|---|---|
08.01. | Michael Huttner | Overview of internal Kubernetes Services // new Authentication System |
15.01. | cancelled | ~ ~ ~ cancelled ~ ~ ~ |
22.01. | Rainer Spang | Discussion on Computer Science curriculum in the University of Regensburg |
29.01. | cancelled | ~ ~ ~ cancelled ~ ~ ~ |
05.02. | Julian Lorenz | Principles of Software Engineering |
12.02 | Rudolf Schill | Mutual Hazard Networks |
19.02. | Marian Schön | |
26.02. | Gunther Glehr | A Story about SWATH, datasets and lasso extensions in the context of lymphoma |
05.03. | Christian Kohler | Open Source Software Licenses explained |
12.03. | Stefan Hansch | dbGaP |
19.03. | Thorsten Rehberg | Tutorial: Writing R and Python Extensions with Compiled Code using HPC Features (AVX2/AVX512, C++11 Threads, BLAS and Cuda GPU acceleration) |
26.03. | Claudio Lottaz | Interpretable Machine Learning [talk] [book (on github)] |
02.04. | workshop | Informatik der Zukunft (09:00 - 12:30) (Vielberth - Gebäude) |
09.04 | Victoria-Marie Rothe | Seminar Statistische Bioinformatik Detecting effective multi-drug combinations [talk] [computational challenge paper, Nature Biotechnology, 2014] [DIGREM paper (Zhang et al, Bioinformatics, 2018)] |
16.04 | Easter Holiday | ~ ~ ~ cancelled ~ ~ ~ |
23.04 | Stefan Kirsch(ITEM, Rgbg) | Oxford Nanopore Technologies |
30.04. | Michael Huttner | Modern Language Design & Introduction into Rust |
07.05. | cancelled | ~ ~ ~ cancelled ~ ~ ~ |
14.05. | Rudolf Schill | Introduction to Tensors |
21.05. | Marian Schön | Low dimensional embedding: T-SNE and UMAP |
28.05. | Kevin Rupp | Seminar Statistische Bioinformatik A complete statistical model for calibration of RNA-seq counts using external spike-ins and maximum likelihood theory [talk] [paper] |
04.06. | Christoph Kopp | Seminar Statistische Bioinformatik RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome [talk] [paper] |
11.06. | Pentecost | ~ ~ ~ cancelled ~ ~ ~ |
18.06. | Martina Häckl | Seminar Statistische Bioinformatik DiPhiSeq: Robust comparison of expression levels on RNA-Seq data with large sample sizes [talk] [paper] |
25.06. | Sibylle Wilfling | Seminar Statistische Bioinformatik Topconfects: a package for confident effect sizes in differential expression analysis provides a more biologically useful ranked gene list. [talk] [paper] |
02.07. | cancelled | ~ ~ ~ cancelled ~ ~ ~ |
05.07. (Fr !) | Stefan Bentink | Guest Speaker (former PhD student in Rainer Spangs' group) |
09.07. | Victoria-Marie Rothe | Nucleosome Dynamics during the Erythrocytic Cycle of Plasmodium Falciparum |
16.07. | cancelled | Symposium - Biomolecular Imaging Meets Immuno-Oncology |
23.07. | Max Pichler | Machine Learning can infer trait matching and predict species interactions in ecological networks |
30.07. | Daniel Grünbaum | Non-negative Matrix Factorization for the Analysis of Wafer Test Data |
01.08. - 16.09. | Summer Break | ~ ~ ~ cancelled ~ ~ ~ |
17.09. | Marian Schön | Coding Guidelines for Spang-Lab-Projects |
24.09 | Hike Weltenburg | ~ ~ ~ cancelled ~ ~ ~ |
01.10 | Gunther Glehr(10:00 s.t) | Flow Cytometry - Principles, Challenges, Algorithms |
08.10. | cancelled | due to lecture " Computational Statistics für Physiker und Bioinformatiker" by Michael Altenbuchinger, PhD |
15.10 | Claudio Lottaz | Excerpts from the Code of Ethics and Professional Conduct by the ACM [paper] [talk] |
22.10. | Christian Kohler | Let's Encrypt Certificates For Docker Container - The Smart Way |
29.10. | Jakob Simeth | Cell Prototype Selection for DTD |
05.11. | Michael Huttner | L-Patho: Preprocessing huge images for deep learning |
12.11. | Johannes Falk
Maria Attenberger | Bachelorthesis: Explorative Analysis of Lymphoma DNA Methylation Data using Digital Tissue Deconvolution
Bachelorthesis:Validating DTD Immune Cell Estimations via Survival Analyses in Lymphoma |
19.11. | Rudi Schill |
References: Tensors and Latent Variable Models Hand-waving and Interpretive Dance: An Introductory Course on Tensor Networks A literature survey of low-rank tensor approximation techniques |
26.11. | Marian Schön | Intratumor heterogeneity of nodal B cell lymphomas |
03.12.(09:30) | Felix Gottschlich | Seminar Algorithmische Bioinformatik A framework and an algorithm to detect low-abundance DNA by a handy sequencer and a palm-sized computer [paper] [talk] |
03.12.(10:15) | Julian Lorenz | Seminar Algorithmische Bioinformatik A Sequence-Based Novel Approach for Quality Evaluation of Third-Generation Sequencing Reads [paper] [talk] |
10.12.(09:30) | Marcel Mück | Seminar Algorithmische Bioinformatik |
10.12.(10:15) | Johannes Falk | Seminar Algorithmische Bioinformatik Hercules: a profile HMM-based hybrid error correction algorithm for long reads [paper] [talk] |
17.12.(09:30) | Martina Häckl | Seminar Algorithmische Bioinformatik |
17.12.(10:15) | Sibylle Wilfling | Seminar Algorithmische Bioinformatik |