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Suchergebnisse

• "On the Approximability of the Maximum Interval Constrained Coloring Problem", Canzar, Elbassioni, Elmasry, Raman, 2010

  Publikation

  1611-3349,0302-9743 10.1007/978-3-642-17514-5_15

  Publikation auf epub.uni-regensburg.de: "On the Approximability of the Maximum Interval Constrained Coloring Problem" (externer Link, öffnet neues Fenster)

• "Computing H/D-Exchange rates of single residues from data of proteolytic fragments", Althaus, Canzar, Ehrler, Emmett, Karrenbauer, Marshall, Meyer-Bäse, Tipton, Zhang, 2010

  Publikation

  Background Protein conformation and protein/protein interaction can be elucidated by solution-phase Hydrogen/Deuterium exchange (sHDX) coupled to...

  Publikation auf epub.uni-regensburg.de: "Computing H/D-Exchange rates of single residues from data of proteolytic fragments" (externer Link, öffnet neues Fenster)

• "On Tree-Constrained Matchings and Generalizations", Canzar, Elbassioni, Klau, Mestre, 2011

  Publikation

  1611-3349,0302-9743 10.1007/978-3-642-22006-7_9

  Publikation auf epub.uni-regensburg.de: "On Tree-Constrained Matchings and Generalizations" (externer Link, öffnet neues Fenster)

• "A Mathematical Programming Approach to Marker-Assisted Gene Pyramiding", Canzar, El-Kebir, 2011

  Publikation

  In the crossing schedule optimization problem we are given an initial set of parental genotypes and a desired genotype, the ideotype. The task is to...

  Publikation auf epub.uni-regensburg.de: "A Mathematical Programming Approach to Marker-Assisted Gene Pyramiding" (externer Link, öffnet neues Fenster)

• "Linear-time cluster ensembles of large-scale single-cell RNA-seq and multimodal data", Do, Rojas Ringeling, Canzar, 2021

  Publikation

  A fundamental task in single-cell RNA-seq (scRNA-seq) analysis is the identification of transcriptionally distinct groups of cells. Numerous methods...

  Publikation auf epub.uni-regensburg.de: "Linear-time cluster ensembles of large-scale single-cell RNA-seq and multimodal data" (externer Link, öffnet neues Fenster)

• "McSplicer: a probabilistic model for estimating splice site usage from RNA-seq data", Alqassem, Sonthalia, Klitzke-Feser, Shim, Canzar, 2021

  Publikation

  Motivation Alternative splicing removes intronic sequences from pre-mRNAs in alternative ways to produce different forms (isoforms) of mature mRNA....

  Publikation auf epub.uni-regensburg.de: "McSplicer: a probabilistic model for estimating splice site usage from RNA-seq data" (externer Link, öffnet neues Fenster)

• "A generalization of t-SNE and UMAP to single-cell multimodal omics", Do, Canzar, 2021

  Publikation

  Emerging single-cell technologies profile multiple types of molecules within individual cells. A fundamental step in the analysis of the produced...

  Publikation auf epub.uni-regensburg.de: "A generalization of t-SNE and UMAP to single-cell multimodal omics" (externer Link, öffnet neues Fenster)

• "Predicting RNA splicing branchpoints", Jovanovic, Alqassem, Chappell, Canzar, Matijević, 2022

  Publikation

  RNA splicing is a process where introns are removed from pre-mRNA, resulting in mature mRNA. It requires three main signals, a donor splice site...

  Publikation auf epub.uni-regensburg.de: "Predicting RNA splicing branchpoints" (externer Link, öffnet neues Fenster)

• "Guided Reconstruction of Full-Length Isoforms from Short Reads by CIDANE", Andreotti, Canzar, 2018

  Publikation

  Alternative splicing allows genes to express isoforms with different coding or regulatory functions on demand. While short read deep sequencing...

  Publikation auf epub.uni-regensburg.de: "Guided Reconstruction of Full-Length Isoforms from Short Reads by CIDANE" (externer Link, öffnet neues Fenster)

• "Genome wide association analysis in a mouse advanced intercross line", Gonzales, Seo, Hernandez Cordero, St. Pierre, Gregory, Distler, Abney, Canzar, Lionikas, Palmer, 2018

  Publikation

  The LG/J x SM/J advanced intercross line of mice (LG x SM AIL) is a multigenerational outbred population. High minor allele frequencies, a simple...

  Publikation auf epub.uni-regensburg.de: "Genome wide association analysis in a mouse advanced intercross line" (externer Link, öffnet neues Fenster)